RNALocate v3.0

     We provide statistical information about 'Relationship Distribution' about RNA/Localization Information, Category and Species of all entries involved in RNALocate. On the other, the 'experimental methods' associated RNA-Localization entries are also included.


     Number of entries: 1,844,013
     Number of species: 242
     Number of subcellular localizations: 177

Experimental Data

Note

     Click each legend to hide its type share and recalculate the rest proportion distribution.
     Pie plot shows the proportion distribution of each category, bar plot shows the concrete count of each category.

Strong detection methods Weak detection methods
A new method based on an activated fluorescence signal triggered by an alteration of the specific binding-induced conformation of the designed activatable probe APEX-seq
Absolute qPCR quantification analysis Bulk sequencing analysis
Absolute quantitative real-time PCR CAP-miRSeq
Autoradiography Chip array
BaseScope assay CircRNA array
BaseScope RISH assay CircRNA microarray
Basescope-FISH CLIP-seq
Biochemical fractionation Deep sequencing
Biochemical subcellular fractionation exomiRNA analysis
Cell cytoplasmic/nuclear fractionation assay Full-length transcriptome sequencing
Cell cytosolic/nuclear fractions assay GeneChip miR microarray
Cell fractionation assay GRO-seq
Cell-fractionation assay high-throughput miRNA sequencing
Cellular fraction assay high-throughput next-generation sequencing
Cellular fractionation assay high-throughput sequencing
Cellular localization assay HiSeq sequencing
Cellular location assay Human transcriptome array
Cellular RNA fractionation assay Illumina high-throughput sequencing
ChIP-qPCR Illumina sequencing
ChIRP assay lncRNA microarray
Chromatin fractionation lncRNA sequencing
Chromatin fractionation assay lncRNA-seq
CISH Microarray
Co-localization staining MicroRNA (miR) array analysis
Confocal FISH MicroRNA (miRNA) sequencing
Confocal microscope-based FISH MicroRNA array analysis
Confocal microscopy ISH MicroRNA microarray analysis
CR-RT-PCR MicroRNA sequencing
Cytoplasm/nucleus separation MicroRNAs Microarray
Cytoplasmic and exosome RNA fractionation experiment MicroRNA-Seq
Cytoplasmic and nuclear fractionation assay MiR-chip array
Cytoplasmic and nuclear mRNA fractionation experiment miRNA array analysis
Cytoplasmic and nuclear RNA fractionation assay miRNA chip assay
Cytoplasmic and nuclear RNA isolation experiments miRNA chip microarray
Cytoplasmic and nuclear RNA purification assay miRNA deep sequencing
Cytoplasmic and nuclear RNA separation assay miRNA high-throughput sequencing
Cytoplasmic isolation assay miRNA microarray
Cytoplasmic/nuclear fractionation assay miRNA microarray analysis
Cytoplasmic/nuclear RNA separation miRNA PCR array
Cytoplasmic-nuclear fractionation assay miRNA sequencing
Cytosolic/nuclear fractionation assay miRNA-seq
Cytosolic/nuclear fractions assay miRNA-sequencing analysis
ddPCR mRNA sequencing
Digital droplet PCR NanoString analysis
Double FISH NanoString assay
Double FISH (D-FISH) assay NanoString miRNA array
Double-FISH NanoString miRNA assay
dPCR NanoString nCounter assay
Droplet digital PCR Next deep sequencing of small RNAs
Droplet digital PCR (ddPCR) Next generation miRNA sequencing
Droplet digital polymerase chain reaction Next generation sequencing
Dual luciferase activity assay Next generation sequencing (NGS)
Dual luciferase reporter assay Next-generation miRNA sequencing
Dual RNA-FISH Next-generation RNA sequencing
Electron microscopy ISH Next-generation sequencing
Electrophoretic analysis Next-generation sequencing (NGS)
FISH Next-generation small RNA sequencing (NGS)
FISH analysis NGS analysis
FISH assay NGS sequencing
FISH experiment PacBio long-read sequencing
FISH Immunofluorescence Double Labeling PCR array
FISH/IF qPCR array
FISH-immuno qRT-PCR-based array
Fluorescence analysis RIP-Chip
Fluorescence in situ hybridization assay RIP-Seq
Fluorescence intensity spectrum analysis RNA deep sequencing
Fluorescence quantitative PCR RNA sequencing
Fluorescent immunostaining RNA-seq
Fluorescent in situ hybridization RNA-sequencing
Fluorescent RNA ISH RT-qPCR assay
Fractionation and export assay Sanger sequencing
Fractionation assay Sequencing
Fractionation of cellular compartments Small non-coding RNA sequencing
Fractionation of cytoplasmic and nuclear RNA assay Small RNA (sRNA) sequencing
Fractionation of nuclear and cytoplasmic RNA assay Small RNA sequencing
FRISH Small RNA-seq
Functional RISC-activity analysis Small RNA-sequencing
Gel mobility shift assay Small-RNA sequencing
HCR-RNA FISH smRNA-sequencing
HR-FISH Solexa sequencing
HT-smFISH SOLiD sequencing
IF sRNA sequencing
IFA sRNA-seq
IF-coupled smiFISH experiment TaqMan custom array
IF-Fish TaqMan miRNA array
IF-FISH assay TaqMan OpenArray Human Advanced MicroRNA Panel
IHC TaqMan™ Advanced miRNA Arrays
Immunocytochemistry Transcriptome sequencing analysis
Immunofluorescence
Immunofluorescence (IF)
Immunofluorescence analysis
Immunofluorescence assay
Immunofluorescence double-labeling experiment
Immunofluorescence staining
Immunofluorescence-RNA FISH
Immunohistochemistry
Immunoprecipitation
Immunostaining
Immuno-wmFISH
In situ hybridization
In situ hybridization (ISH)
In situ hybridization assay
In situ RT-PCR
In vitro binding assay
Indirect immunofluorescence assay
Intracellular fraction assay
Intracellular localization
Intracellular location analysis
Inverse RT-PCR
ISH
ISH (in situ hybridization)
ISH assay
ISHH
LNA FISH
LNA ISH
Luciferase reporter assay
Microarray in situ hybridization
miRNA FISH
miRNA PCR assay
mitochondrial-cytoplasmic separation assay
Multiplex quantitative RT-PCR
Nested RT-PCR
Nonradioactive in situ hybridization
Northern blot
Northern blot analysis
Northern blot hybridization
Northern blotting
Northern hybridization
Nuclear and cytoplasm fractionation assay
Nuclear and cytoplasmic analysis
Nuclear and cytoplasmic extraction assay
Nuclear and cytoplasmic fraction assay
Nuclear and cytoplasmic fractionation assay
Nuclear and cytoplasmic localization detection
Nuclear and cytoplasmic purification
Nuclear and cytoplasmic RNA fractionation assay
Nuclear and cytoplasmic RNA separation assay
Nuclear and cytoplasmic RNA-seq
Nuclear and cytoplasmic separation assay
Nuclear and cytosolic fractionation assay
Nuclear and cytosolic separation assay
Nuclear fraction assay
Nuclear fraction experiment
Nuclear fractionation assay
Nuclear mass separation assay
Nuclear run-on analysis
Nuclear separation experiment
Nuclear/cytoplasm fractionation
Nuclear/cytoplasm separation assay
Nuclear/cytoplasmic extract isolation assay
Nuclear/cytoplasmic fractionation
Nuclear/cytoplasmic fractionation assay
Nuclear/cytoplasmic fractionation-qPCR
Nuclear/cytoplasmic RNA fractionation analysis
Nuclear/cytoplasmic separation assay
Nuclear/cytosol fractionation assay
Nuclear/cytosolic fractionation assay
Nuclear-cytoplasm isolation assay
Nuclear-cytoplasm separation assay
Nuclear-cytoplasmic fractionation
Nuclear-cytoplasmic fractionation assay
Nuclear-cytoplasmic isolation experiments
Nuclear-cytoplasmic RNA fractionation assay
Nuclear-cytoplasmic RNA separation assay
Nuclear-cytoplasmic separation assay
Nuclear-cytosol fractionation
Nuclear-plasma extraction assay
Nucleo-cytoplasm separation assay
Nucleocytoplasmic fractionation assay
Nucleocytoplasmic isolation assay
Nucleocytoplasmic RNA fractionation
Nucleocytoplasmic separation assay
Nucleo-cytoplasmic separation assay
Nucleocytoplasmic separation qRT-PCR
Nucleolus and nucleoplasm fractionation
Nucleoplasm separation assay
Nucleoplasm separation experiments
Nucleoplasmic isolation
Nucleoplasmic separation assay
Nucleo-plasmic separation assay
Nucleus and cytoplasm separation experiment
Nucleus cytoplasm separation
Nucleus/cytoplasm separation assay
Nucleus/cytosol RNA separation assay
Nucleus-cytoplasm fractionation
Nucleus-cytoplasmic fractionation assay
Nucleus-cytoplasmic separation assay
Nucleus-plasma separation assay
one-step real-time PCR
Organelle-targeted imaging based on fluorogen-activating RNA aptamers
Padlock assay
PCR
PCR analysis
PCR-based genomic-tagging strategy (m-TAG)
polymerase chain reaction
Polysome fractionation analysis
PrimeFlow™ assay
Proximity ligation assay
Q-FISH
QPCR
Q-PCR
qPCR assay
qRT-PCR assay
QT-PCR
Quantitative PCR
Quantitative qPCR
Quantitative real-time PCR
Quantitative real-time polymerase chain reaction
Quantitative RNA localization assay
Quantitative RT-PCR assay
Real time PCR
Real time qPCR
Real time RT-PCR
Real-time PCR assay
Real-time polymerase chain reaction
Real-time qPCR
Real-time qRT-PCR
Real-time quantitative PCR
Real-time reverse-transcription quantitative PCR
Real-time RT-PCR
Reverse transcription polymerase chain reaction
Reverse transcription-quantitative PCR
Ribonuclease protection assay
RIP
RIP assay
RIP-qPCR
RNA antisense purification
RNA Co-immunoprecipitation
RNA cytosolic/nuclear fraction assay
RNA FISH assay
RNA fluorescence in situ hybridization (FISH)
RNA fluorescence in situ hybridization assay
RNA fluorescent in situ hybridization
RNA fractionation (nuclear/cytosolic) assay
RNA gel blot analysis
RNA hybridization analysis
RNA in situ hybridisation
RNA in situ hybridization
RNA ISH
RNA nuclear and cytoplasmic isolation assay
RNA nucleoplasmic isolation assay
RNA pull down assay
RNA SCOPE assay
RNA-binding protein immunoprecipitation (RIP) assay
RNA-FISH assay
RNA-FISH/IF
RNA-fluorescence in situ hybridization
RNA-ISH
RNA-scope
RNAscope assay
RNAscope fluorescence in situ hybridization
RNAscope in situ assay
RNAscope in situ hybridization
RNAScope in situ hybridization(RNA-ISH)
RNAscope ISH
RNAscope ISH staining
RNAscope/MR-PLISH
RNase protection assay
RPA
RT-ddPCR
RT-digital PCR
RT-PCR
RT-qPCR
RT-Q-PCR
RT-qPCR assay
RT-quantitative PCR (qPCR)
S1 nuclease protection assay
Semi-PCR
Semi-qPCR
Semiquantitative PCR
Semi-quantitative PCR
Semi-quantitative real time RT-PCR
Semiquantitative RT-PCR
Single molecule Fluorescence In Situ Hybridization (smFISH)
Single molecule fluorescent in vitro hybridization (FISH)
Single Molecule Localization Microscopy (SMLM)
Single TaqMan PCR assay
Single-molecule FISH
Single-molecule fluorescence in situ hybridization (smFISH)
Single-molecule RNA fluorescence in situ hybridization (smFISH)
Single-molecule RNA-FISH
smFISH
smFISH assay
smFISH-IF
smiFISH
smRNA-FISH
sqPCR
sqRT-PCR
SR-3DSIM
sRNA-FISH
Stem-loop qRT-PCR
Strand-specific qRT-PCR
subcellular distribution assay
subcellular fraction assay
subcellular fraction location assay
subcellular fractionation and localization assay
subcellular fractionation assay
sub-cellular fractionation assay
subcellular fractionation detection
subcellular fractionation experiment
subcellular fractionation localization assay
subcellular fractionation location assay
subcellular grading determination
subcellular isolation assay
subcellular localization assay
subcellular location assay
subcellular RNA fractionation assay
subcellular separation assay
Subtractive hybridization
TaqMan Low Density Assay
TaqMan low-density miRNA array
TaqMan miRNA assay
Taqman PCR
TaqMan probe-based qRT-PCR
Taqman qPCR
TaqMan qRT-PCR
TaqMan real-time PCR
TaqMan stem-loop RT-PCR
Target-specific PCR
the cytoplasm/nucleus enrichment experiment
the nuclear and cytoplasmic RNA fractions experiment
TM-qPCR
Whole-mount electron microscopy in situ hybridization
Whole-mount in situ hybridization
ZFAS1-FISH assay