Basic Information
| Dataset | GSE99366 |
|---|---|
| Status | 2019-01-01 |
| Species | Mus musculus |
| Source | NCBI GEO |
| Subcellular Localization | chromatin|nucleoplasm|cytoplasm |
| Title | RNA-seq of subcellular fractions from nESC and EpiLC |
| Experimental Design | RNA-seq of 3 subcellular fractions (chromatin, nucleoplasmic and cytoplasmic) from nESC and EpiLC. |
Sample Information
| BioProject | Sample Name | Localization | Source | Label |
|---|---|---|---|---|
| PRJNA388206 | GSM2643079 | chromatin | E14 nESC | nESC_chr_rep1 |
| PRJNA388206 | GSM2643080 | chromatin | E14 nESC | nESC_chr_rep2 |
| PRJNA388206 | GSM2643081 | chromatin | E14 nESC | nESC_chr_rep3 |
| PRJNA388206 | GSM2643082 | nucleoplasmic | E14 nESC | nESC_sol_rep1 |
| PRJNA388206 | GSM2643083 | nucleoplasmic | E14 nESC | nESC_sol_rep2 |
| PRJNA388206 | GSM2643084 | nucleoplasmic | E14 nESC | nESC_sol_rep3 |
| PRJNA388206 | GSM2643085 | cytoplasmic | E14 nESC | nESC_cyt_rep1 |
| PRJNA388206 | GSM2643086 | cytoplasmic | E14 nESC | nESC_cyt_rep2 |
| PRJNA388206 | GSM2643087 | cytoplasmic | E14 nESC | nESC_cyt_rep3 |
| PRJNA388206 | GSM2643088 | total | E14 nESC | nESC_tol_rep1 |
| PRJNA388206 | GSM2643089 | total | E14 nESC | nESC_tol_rep2 |
| PRJNA388206 | GSM2643090 | total | E14 nESC | nESC_tol_rep3 |
| PRJNA388206 | GSM2643091 | chromatin | E14 EpiLC | EpiLC_chr_rep1 |
| PRJNA388206 | GSM2643092 | chromatin | E14 EpiLC | EpiLC_chr_rep2 |
| PRJNA388206 | GSM2643093 | chromatin | E14 EpiLC | EpiLC_chr_rep3 |
| PRJNA388206 | GSM2643094 | nucleoplasmic | E14 EpiLC | EpiLC_sol_rep1 |
| PRJNA388206 | GSM2643095 | nucleoplasmic | E14 EpiLC | EpiLC_sol_rep2 |
| PRJNA388206 | GSM2643096 | nucleoplasmic | E14 EpiLC | EpiLC_sol_rep3 |
| PRJNA388206 | GSM2643097 | cytoplasmic | E14 EpiLC | EpiLC_cyt_rep1 |
| PRJNA388206 | GSM2643098 | cytoplasmic | E14 EpiLC | EpiLC_cyt_rep2 |
| PRJNA388206 | GSM2643099 | cytoplasmic | E14 EpiLC | EpiLC_cyt_rep3 |
| PRJNA388206 | GSM2643100 | total | E14 EpiLC | EpiLC_tol_rep1 |
| PRJNA388206 | GSM2643101 | total | E14 EpiLC | EpiLC_tol_rep2 |
| PRJNA388206 | GSM2643102 | total | E14 EpiLC | EpiLC_tol_rep3 |
Subcellular Localization Number
RNA Type:
Condition:
Localization Differential Analysis
RNA Type:
Localization:
Condition:
Method:
Enrichment:
Specific Subcellular Localization
RNA Type:
Method:
Dynamic RNA Localization
RNA Type:
Method:
Specific Enrichment Analysis
RNA Type:
Localization:
Condition:
Method:
Enrichment:
Specific RNA Ratio
RNA Type:
RNA Symbol:
TPM:
