Basic Information
| Dataset | GSE110727 |
|---|---|
| Status | 2019-11-14 |
| Species | Homo sapiens |
| Source | NCBI GEO |
| Subcellular Localization | nuclear|cytoplasmic |
| PMID | 33603054 |
| Title | Characterization of the nuclear and cytosolic transcriptomes in human brain tissue |
| Citation | Zaghlool A, Niazi A, Björklund ÅK, Westholm JO et al. Characterization of the nuclear and cytosolic transcriptomes in human brain tissue reveals new insights into the subcellular distribution of RNA transcripts. Sci Rep 2021 Feb 18;11(1):4076. |
| Experimental Design | Nuclear and cytoplasmic fraction of tissues from adult and fetal human frontal cortex and cerebellum. |
Sample Information
| BioProject | Sample Name | Localization | Sex | Individual | Source | Label |
|---|---|---|---|---|---|---|
| PRJNA434426 | GSM3015258 | cytoplasmic | male | Fetal 1 | frontal cortex (fetal) | fc_fetal_cyto63_3 |
| PRJNA434426 | GSM3015259 | nuclear | male | Fetal 1 | frontal cortex (fetal) | fc_fetal_nuc64_3 |
| PRJNA434426 | GSM3015260 | cytoplasmic | male | Fetal 1 | cerebellum (fetal) | cer_fetal_cyto63_4 |
| PRJNA434426 | GSM3015261 | nuclear | male | Fetal 1 | cerebellum (fetal) | cer_fetal_nuc64_4 |
| PRJNA434426 | GSM3015262 | cytoplasmic | female | Fetal 2 | frontal cortex (fetal) | fc_fetal_cyto63_5 |
| PRJNA434426 | GSM3015263 | nuclear | female | Fetal 2 | frontal cortex (fetal) | fc_fetal_nuc64_5 |
| PRJNA434426 | GSM3015264 | cytoplasmic | female | Fetal 2 | cerebellum (fetal) | cer_fetal_cyto63_6 |
| PRJNA434426 | GSM3015265 | nuclear | female | Fetal 2 | cerebellum (fetal) | cer_fetal_nuc64_6 |
| PRJNA434426 | GSM3015266 | cytoplasmic | female | Fetal 3 | frontal cortex (fetal) | fc_fetal_cyto63_7 |
| PRJNA434426 | GSM3015267 | nuclear | female | Fetal 3 | frontal cortex (fetal) | fc_fetal_nuc64_7 |
| PRJNA434426 | GSM3015268 | cytoplasmic | female | Fetal 3 | cerebellum (fetal) | cer_fetal_cyto63_8 |
| PRJNA434426 | GSM3015269 | nuclear | female | Fetal 3 | cerebellum (fetal) | cer_fetal_nuc64_8 |
| PRJNA434426 | GSM3015270 | cytoplasmic | female | Adult 1 | frontal cortex (adult) | fc_adult_cyto194_0 |
| PRJNA434426 | GSM3015271 | cytoplasmic | female | Adult 2 | frontal cortex (adult) | fc_adult_cyto194_1 |
| PRJNA434426 | GSM3015272 | cytoplasmic | female | Adult 3 | frontal cortex (adult) | fc_adult_cyto194_2 |
| PRJNA434426 | GSM3015273 | cytoplasmic | female | Adult 4 | frontal cortex (adult) | fc_adult_cyto194_3 |
| PRJNA434426 | GSM3015274 | cytoplasmic | female | Adult 5 | frontal cortex (adult) | fc_adult_cyto194_4 |
| PRJNA434426 | GSM3015275 | cytoplasmic | female | Adult 6 | frontal cortex (adult) | fc_adult_cyto194_5 |
| PRJNA434426 | GSM3015276 | nuclear | female | Adult 1 | frontal cortex (adult) | fc_adult_nuc_194_11 |
| PRJNA434426 | GSM3015277 | nuclear | female | Adult 2 | frontal cortex (adult) | fc_adult_nuc_194_6 |
| PRJNA434426 | GSM3015278 | nuclear | female | Adult 3 | frontal cortex (adult) | fc_adult_nuc_194_7 |
| PRJNA434426 | GSM3015279 | nuclear | female | Adult 4 | frontal cortex (adult) | fc_adult_nuc_194_8 |
| PRJNA434426 | GSM3015280 | nuclear | female | Adult 5 | frontal cortex (adult) | fc_adult_nuc_194_9 |
| PRJNA434426 | GSM3015281 | nuclear | female | Adult 6 | frontal cortex (adult) | fc_adult_nuc_194_10 |
Subcellular Localization Number
RNA Type:
Condition:
Localization Differential Analysis
RNA Type:
Localization:
Condition:
Method:
Enrichment:
Specific Subcellular Localization
RNA Type:
Method:
Dynamic RNA Localization
RNA Type:
Method:
Specific Enrichment Analysis
RNA Type:
Localization:
Condition:
Method:
Enrichment:
Specific RNA Ratio
RNA Type:
RNA Symbol:
TPM:
